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Hi Sarah,
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<div class="">cfg.trials should be a numeric array, not a cell-array: in your case, when you use cfg.trials = groups{igroup} it will not work.</div>
<div class="">JAn-Mathijs</div>
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<div><br class="">
<blockquote type="cite" class="">
<div class="">On 3 Jun 2019, at 18:05, Sarah Gerson <<a href="mailto:GersonS@cardiff.ac.uk" class="">GersonS@cardiff.ac.uk</a>> wrote:</div>
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Dear Jan-Mathijs,
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<div class="">Good questions I checked and they all have at least some cells:</div>
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<div class="">groups =</div>
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<div class="">  1×3 cell array</div>
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<div class="">    {7×1 cell}    {7×1 cell}    {4×1 cell}</div>
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<div class="">I also tried starting with groupi = 2 to ensure it’s not just a problem with the first array, but I received the same error.</div>
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</div>
<div class="">Best,</div>
<div class="">Sarah</div>
</div>
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<font class="" face="Helvetica"><b class="" style="font-size: 14px;">Sarah A Gerson, PhD</b></font></div>
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<blockquote type="cite" class="">
<div class="">On 3 Jun 2019, at 15:43, Schoffelen, J.M. (Jan Mathijs) <<a href="mailto:jan.schoffelen@donders.ru.nl" class="">jan.schoffelen@donders.ru.nl</a>> wrote:</div>
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<div class="">Dear Sarah,</div>
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Hmm, hard to tell. Have you checked whether any of the cells in the variable ‘groups’ is empty? Does it happen for each of the ‘groupi’ iterations? Are the elements in groups of type numeric?
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<div class="">Best wishes,</div>
<div class="">Jan-Mathijs</div>
<div class=""><br class="">
<div class=""><br class="">
<blockquote type="cite" class="">
<div class="">On 31 May 2019, at 11:53, Sarah Gerson <<a href="mailto:GersonS@cardiff.ac.uk" class="">GersonS@cardiff.ac.uk</a>> wrote:</div>
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Hi everyone,
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</div>
<div class="">I’m trying to revive an old processing script for TFRs on a new computer and am running into an error I can’t seem to track down.</div>
<div class="">I want to run ft_freqanalysis and am trying to use a data file that is the output of a preprocessing script that worked fine. As far as I can tell from the fieldtrip guidance/forum, the data structure should be fine, but I am receiving an error
 stating that it needs to be a cell array (among other errors). </div>
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</div>
<div class="">Any help or guidance is greatly appreciated!</div>
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</div>
<div class="">For reference, I’ll copy and paste the code that’s creating the error, the errors received, and the data file structure (since this seems to be a source of the error):</div>
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<div class="">Code:</div>
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<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
 <span style="color: #0000ff" class="">for</span> groupi = 1:3</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
    windowsize = 0.5;</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier; min-height: 12px;" class="">
    <br class="webkit-block-placeholder">
</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
      disp(<span style="color: #a020f0" class="">'----'</span>);       disp(<span style="color: #a020f0" class="">'----'</span>);</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        disp([<span style="color: #a020f0" class="">'loading data from subject '</span>, num2str(subjects),
<span style="color: #a020f0" class="">' || '</span>, <span style="color: #a020f0" class="">
'groups '</span>, num2str(groupi)]);</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        disp(<span style="color: #a020f0" class="">'----'</span>);       disp(<span style="color: #a020f0" class="">'----'</span>);</div>
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    <br class="webkit-block-placeholder">
</div>
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        cfg = [];</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        cfg.trials         = groups{groupi}<span style="color: #228b22" class="">%(((length(groups{groupi})/2)+1):end);</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        cfg.output         = <span style="color: #a020f0" class="">'pow'</span>;</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        cfg.method         = <span style="color: #a020f0" class="">'mtmconvol'</span>;
<span style="color: #228b22" class="">%'mtmfft';</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        cfg.channel         = {<span style="color: #a020f0" class="">'all'</span>};
<span style="color: #228b22" class="">%mtmfft</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        cfg.taper          = <span style="color: #a020f0" class="">'hanning'</span>;
<span style="color: #228b22" class="">%'dpss';</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        cfg.tapsmofrq      = 3;</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        cfg.foi            = 1:50;</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        cfg.t_ftimwin      =  ones(1, length(cfg.foi))*windowsize; <span style="color: #228b22" class="">
% ones(length(cfg.foi),1).*0.5;</span></div>
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        cfg.toi            = [reref_datam{subject}.time{1}(1) + windowsize/2 : windowsize/5 : reref_datam{subjects}.time{1}(end) - windowsize/2]
<span style="color: #228b22" class="">%0:0.1:2;</span></div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        TFR_cond{subjects, groupi}               = ft_freqanalysis(cfg, reref_datam{subjects});</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
        TFR_cond{subjects, groupi}.cfg = [];</div>
<div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Courier;" class="">
    <span style="color: #0000ff" class="">end</span>;</div>
</div>
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<div class="">Errors:</div>
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<div class=""><font color="#ff2600" class="">Error using sort</font></div>
<div class=""><font color="#ff2600" class="">Input argument must be a cell array of character vectors.</font></div>
<div class=""><font color="#ff2600" class=""><br class="">
</font></div>
<div class=""><font color="#ff2600" class="">Error in ft_selectdata>getselection_rpt (line 1128)</font></div>
<div class=""><font color="#ff2600" class="">  rptindx = unique(sort(rptindx));</font></div>
<div class=""><font color="#ff2600" class=""><br class="">
</font></div>
<div class=""><font color="#ff2600" class="">Error in ft_selectdata (line 302)</font></div>
<div class=""><font color="#ff2600" class="">    [selrpt{i}, dum, rptdim{i}, selrpttap{i}] = getselection_rpt(cfg, varargin{i}, dimord{j});</font></div>
<div class=""><font color="#ff2600" class=""><br class="">
</font></div>
<div class=""><font color="#ff2600" class="">Error in ft_freqanalysis (line 234)</font></div>
<div class=""><font color="#ff2600" class="">data = ft_selectdata(tmpcfg, data);</font></div>
<div class=""><font color="#ff2600" class=""> </font></div>
</div>
</div>
<div class="">Structure of data:</div>
<div class="">
<div class="">reref_datam{subjects}</div>
<div class=""><br class="">
</div>
<div class="">ans = </div>
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</div>
<div class="">  struct with fields:</div>
<div class=""><br class="">
</div>
<div class="">           hdr: [1×1 struct]</div>
<div class="">       fsample: 500</div>
<div class="">    sampleinfo: [95×2 double]</div>
<div class="">     trialinfo: [95×1 double]</div>
<div class="">         trial: {1×95 cell}</div>
<div class="">          time: {1×95 cell}</div>
<div class="">         label: {31×1 cell}</div>
<div class="">           cfg: [1×1 struct]</div>
</div>
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<font class="" face="Helvetica"><b class="" style="font-size: 14px;">Sarah A Gerson, PhD</b></font></div>
<div class="" style="margin: 0cm 0cm 0.0001pt;"><font class="" style="font-size: 14px;">Lecturer</font></div>
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<font class="" face="Helvetica" style="font-size: 14px;">School of Psychology<br class="">
College of Biomedical & Life Sciences<br class="">
Cardiff University<br class="">
70 Park Place<br class="">
Cardiff<br class="">
CF10 3AT<o:p class=""></o:p></font></div>
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<font class="" face="Helvetica" style="font-size: 14px;"><span lang="FR" class="">Tel: +44 (0)29 2087 0480</span><o:p class=""></o:p></font></div>
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<font class="" face="Helvetica"><span lang="FR" class="" style="font-size: 14px;">Email: <a href="mailto:GersonS@cardiff.ac.uk" class="">GersonS@cardiff.ac.uk</a></span></font></div>
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<font class="" face="Helvetica" style="font-size: 14px;"><a href="http://psych.cf.ac.uk/contactsandpeople/gersons.php" class="">http://psych.cf.ac.uk/contactsandpeople/gersons.php</a></font></div>
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<font class="" face="Helvetica"><span class="" style="color: rgb(56, 55, 53); background-color: rgb(255, 255, 255); font-size: 14px;">The University welcomes correspondence in Welsh or English.</span></font></div>
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<div class="" style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: Cambria;">
<font class="" face="Helvetica"><b class="" style="font-size: 14px;">Sarah A Gerson, PhD</b></font></div>
<div class="" style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: Cambria;">
<font class="" face="Helvetica" style="font-size: 14px;">Darlithydd</font></div>
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<font class="" face="Helvetica" style="font-size: 14px;">Yr Ysgol Seicoleg<br class="">
Coleg y Gwyddorau Biofeddygol a Bywyd<br class="">
Prifysgol Caerdydd <br class="">
70 Plas-y-Parc<br class="">
Caerdydd<br class="">
CF10 3AT<o:p class=""></o:p></font></div>
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<font class="" face="Helvetica" style="font-size: 14px;">Ffôn : +44 (0)29 2087 0480</font></div>
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<font class="" face="Helvetica" style="font-size: 14px;">E-bost: <a href="mailto:GersonS@cardiff.ac.uk" class="">GersonS@cardiff.ac.uk</a></font></div>
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<font face="Helvetica" class=""><span style="font-size: 14px;" class=""><a href="http://psych.cf.ac.uk/contactsandpeople/gersons.php" class="">http://psych.cf.ac.uk/contactsandpeople/gersons.php</a></span></font></div>
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<span class="" style="color: rgb(56, 55, 53); background-color: rgb(255, 255, 255); font-size: 14px;"><font face="Helvetica" class="">Mae'r Brifysgol yn croesawu gohebiaeth yn Gymraeg neu'n Saesneg.</font></span></div>
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