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<p>Dear Jan-Mathijs, <br>
</p>
<p><br>
</p>
<p>I guess it partially worked since it started reading the .set file but still outputed an error:<br>
</p>
<p><br>
</p>
<div>>> cfg.method = 'distance';</div>
<div>cfg.neighbourdist = 4;</div>
<div>cfg.channel = {'FP1', 'FP2', 'F7', 'F3', 'FZ', 'F4', 'F8', 'FT9', 'FC5', 'FT10', 'T7', 'C3',<span style="white-space:pre">
</span>'CZ',<span style="white-space:pre"> </span>'C4',<span style="white-space:pre">
</span>'T8', 'TP9',<span style="white-space:pre"> </span>'CP5',<span style="white-space:pre">
</span>'CP6',<span style="white-space:pre"> </span>'TP10',<span style="white-space:pre">
</span>'P9',<span style="white-space:pre"> </span>'P7',<span style="white-space:pre">
</span>'P3',<span style="white-space:pre"> </span>'PZ',<span style="white-space:pre">
</span>'P4',<span style="white-space:pre"> </span>'P8',<span style="white-space:pre">
</span>'P10',<span style="white-space:pre"> </span>'O1',<span style="white-space:pre">
</span>'OZ',<span style="white-space:pre"> </span>'O2'};</div>
<div>cfg.feedback = 'yes';</div>
<div>cfg.elecfile = 'sub03_Mariam_cues.set';</div>
<div>neighbours = ft_prepare_neighbours(cfg, 'sub03_Mariam_cues.set');</div>
<div>reading electrodes from file 'sub03_Mariam_cues.set'</div>
<div><span style="color: rgb(255, 0, 0); text-decoration: none solid rgb(255, 0, 0);">Attempt to reference field of non-structure array.</span></div>
<div><br style="color: rgb(255, 0, 0); text-decoration: none solid rgb(255, 0, 0);">
</div>
<div><span style="color: rgb(255, 0, 0); text-decoration: none solid rgb(255, 0, 0);">Error in ft_prepare_neighbours (line 176)</span><br style="color: rgb(255, 0, 0); text-decoration: none solid rgb(255, 0, 0);">
</div>
<div><span style="color: rgb(255, 0, 0); text-decoration: none solid rgb(255, 0, 0);"> [dataidx, sensidx] = match_str(data.label, label);</span><br>
</div>
<p><br>
</p>
<p>Is it the .set file that has electrodes as a non-structure array?<br>
</p>
<p><br>
</p>
<p>Best,<br>
</p>
<p>Mariam<br>
</p>
<p><br>
</p>
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<div><font color="#000000" size="2" face="Cambria, serif">Mariam Kostandyan</font></div>
<div><font color="#000000" size="2" face="Cambria, serif">PhD student </font></div>
<div><font size="2" face="Cambria, serif"><span style="color:rgb(0,0,0)">University of Gent</span><span style="color:rgb(0,0,0); line-height:1.2em"><br>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>От:</b> fieldtrip-bounces@science.ru.nl <fieldtrip-bounces@science.ru.nl> от имени Schoffelen, J.M. (Jan Mathijs) <jan.schoffelen@donders.ru.nl><br>
<b>Отправлено:</b> 22 января 2018 г. 13:51<br>
<b>Кому:</b> FieldTrip discussion list<br>
<b>Тема:</b> Re: [FieldTrip] error Conversion to struct in ft_prepare_neighbours</font>
<div> </div>
</div>
<div>Dear Mariam,
<div class=""><br class="">
</div>
<div class="">Perhaps it will work if you remove the ‘elec’-field from the cfg.</div>
<div class=""><br class="">
</div>
<div class="">Best wishes,</div>
<div class="">Jan-Mathijs</div>
<div class=""><br class="">
<div>
<blockquote type="cite" class="">
<div class="">On 22 Jan 2018, at 12:11, Mariam Kostandyan <<a href="mailto:Mariam.Kostandyan@UGent.be" class="">Mariam.Kostandyan@UGent.be</a>> wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
Dear all, <br class="">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
I am quite new to the FieldTrip. I want to use it to check for the inter-electrode distances using the ft_prepare_neighbours function. My script looks like this: <br class="">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
cfg.method = 'distance';</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
cfg.neighbourdist = 4;</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
cfg.channel = {'FP1', 'FP2', 'F7', 'F3', 'FZ', 'F4', 'F8', 'FT9', 'FC5', 'FT10', 'T7', 'C3',<span class="" style="white-space:pre">
</span>'CZ',<span class="" style="white-space:pre"> </span>'C4',<span class="" style="white-space:pre">
</span>'T8', 'TP9',<span class="" style="white-space:pre"> </span>'CP5',<span class="" style="white-space:pre">
</span>'CP6',<span class="" style="white-space:pre"> </span>'TP10',<span class="" style="white-space:pre">
</span>'P9',<span class="" style="white-space:pre"> </span>'P7',<span class="" style="white-space:pre">
</span>'P3',<span class="" style="white-space:pre"> </span>'PZ',<span class="" style="white-space:pre">
</span>'P4',<span class="" style="white-space:pre"> </span>'P8',<span class="" style="white-space:pre">
</span>'P10',<span class="" style="white-space:pre"> </span>'O1',<span class="" style="white-space:pre">
</span>'OZ',<span class="" style="white-space:pre"> </span>'O2'};</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
cfg.feedback = 'yes';</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
cfg.elec = {'FP1', 'FP2', 'F7', 'F3', 'FZ', 'F4', 'F8', 'FT9', 'FC5', 'FT10', 'T7', 'C3',<span class="" style="white-space:pre">
</span>'CZ',<span class="" style="white-space:pre"> </span>'C4',<span class="" style="white-space:pre">
</span>'T8', 'TP9',<span class="" style="white-space:pre"> </span>'CP5',<span class="" style="white-space:pre">
</span>'CP6',<span class="" style="white-space:pre"> </span>'TP10',<span class="" style="white-space:pre">
</span>'P9',<span class="" style="white-space:pre"> </span>'P7',<span class="" style="white-space:pre">
</span>'P3',<span class="" style="white-space:pre"> </span>'PZ',<span class="" style="white-space:pre">
</span>'P4',<span class="" style="white-space:pre"> </span>'P8',<span class="" style="white-space:pre">
</span>'P10',<span class="" style="white-space:pre"> </span>'O1',<span class="" style="white-space:pre">
</span>'OZ',<span class="" style="white-space:pre"> </span>'O2'};</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
cfg.elecfile = 'sub03_Mariam_cues.set';</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
neighbours = ft_prepare_neighbours(cfg, 'sub03_Mariam_cues.set');<br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
When I run it I get error messages: <br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">Error using struct</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">Conversion to struct from cell is not possible.</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="" style="color:rgb(255,0,0)">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">Error in ft_checkconfig (line 248)</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)"> cfg.elec = ft_datatype_sens(struct(cfg.elec));</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="" style="color:rgb(255,0,0)">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">Error in ft_preamble_trackconfig (line 37)</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">cfg = ft_checkconfig(cfg, 'trackconfig', 'on');</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="" style="color:rgb(255,0,0)">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">Error in ft_preamble (line 85)</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">evalin('caller', full_cmd);</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="" style="color:rgb(255,0,0)">
</div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">Error in ft_neighbourplot (line 65)</span></div>
<div class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="color:rgb(255,0,0)">ft_preamble trackconfig</span><br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
How can I fix it? I would appreciate any help. <br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
Best,<br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
Mariam<br class="">
</div>
<div class="" style="margin-top:0px; margin-bottom:0px; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
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</font></div>
<div class=""><font size="2" face="Cambria, serif" class="">Mariam Kostandyan</font></div>
<div class=""><font size="2" face="Cambria, serif" class="">PhD student </font></div>
<div class=""><font size="2" face="Cambria, serif" class=""><span class="" style="">University of Gent</span><span class="" style="line-height:1.2em"><br class="">
</span></font></div>
<div class=""><font size="2" face="Cambria, serif" class=""><span class="" style="line-height:1.2em">Department of Experimental Psychology</span><br class="">
</font></div>
<div class=""><font face="Cambria, serif" class=""><span class="" style="line-height:14px; font-size:small">Henri Dunantlaan 2, </span><span class="" style="line-height:14px; font-size:small">9000 Gent, </span><span class="" style="font-size:small">Belgium</span></font></div>
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<div class="" style="color:rgb(34,34,34); background-color:rgb(255,255,255)"><font size="2" face="Cambria, serif" class=""><span class="" style="">E-mail: </span><a tabindex="0" href="mailto:Mariam.Kostandyan@UGent.be" target="_blank" id="NoLP" class="" style="color:rgb(17,85,204); line-height:14px">Mariam.Kostandyan@UGent.be</a><span class="" style=""> </span><br class="">
</font></div>
<div class="" style="color:rgb(34,34,34); background-color:rgb(255,255,255)"><font size="2" face="Cambria, serif" class="">E-mail: <a tabindex="0" href="mailto:kostandyan.m@gmail.com" target="_blank" id="NoLP" class="" style="color:rgb(17,85,204)">kostandyan.m@gmail.com</a></font></div>
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<span class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255); float:none; display:inline!important">_______________________________________________</span><br class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<span class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255); float:none; display:inline!important">fieldtrip
mailing list</span><br class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<a href="mailto:fieldtrip@donders.ru.nl" class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; orphans:auto; text-align:start; text-indent:0px; text-transform:none; white-space:normal; widows:auto; word-spacing:0px; background-color:rgb(255,255,255)">fieldtrip@donders.ru.nl</a><br class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; background-color:rgb(255,255,255)">
<a href="https://mailman.science.ru.nl/mailman/listinfo/fieldtrip" class="" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:16px; font-style:normal; font-weight:normal; letter-spacing:normal; orphans:auto; text-align:start; text-indent:0px; text-transform:none; white-space:normal; widows:auto; word-spacing:0px; background-color:rgb(255,255,255)">https://mailman.science.ru.nl/mailman/listinfo/fieldtrip</a></div>
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