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<p>Hi Fieldtrippers,<br>
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<p>I have been working on source statistics after source analysis on surfaces using MNE.<br>
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<p>I used the following configuration;<br>
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<div>% run statistics over subjects %</div>
<div>cfg=[];</div>
<div><span style="font-size: 12pt;">cfg.latency = [0 0.7]; %s</span><br>
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<div>cfg.avgovertime = 'no';</div>
<div>cfg.method = 'montecarlo';</div>
<div>cfg.statistic = 'ft_statfun_depsamplesT';</div>
<div>cfg.parameter = 'pow';</div>
<div>cfg.correctm = 'cluster';<br>
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<div>cfg.numrandomization = 100;</div>
<div>cfg.alpha = 0.05; % note that this only implies single-sided testing</div>
<div>cfg.tail = 0;</div>
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<div>cfg.tri = sourcespace.tri;</div>
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<div>nsubj=numel(all_source_intact);</div>
<div>cfg.design(1,:) = [1:nsubj 1:nsubj];</div>
<div>cfg.design(2,:) = [ones(1,nsubj) ones(1,nsubj)*2];</div>
<div>cfg.uvar = 1; % row of design matrix that contains unit variable (in this case: subjects)</div>
<div>cfg.ivar = 2; % row of design matrix that contains independent variable (the conditions)</div>
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<div>stat = ft_sourcestatistics(cfg, all_source_condA{:}, all_source_condB{:});</div>
<div>save('stat_cluster.mat', 'stat');<br>
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<div name="divtagdefaultwrapper" style="font-family:Calibri; font-size:12pt">%----
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<div name="divtagdefaultwrapper" style="font-family:Calibri; font-size:12pt">I wanted to know if there are other options typically set when I do sourcestatistics on surfaces.<br>
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<div name="divtagdefaultwrapper" style="font-family:Calibri; font-size:12pt">Any guide would be helpful.<br>
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<div name="divtagdefaultwrapper" style="font-family:Calibri; font-size:12pt">Thank you.<br>
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<div name="divtagdefaultwrapper" style="font-family:Calibri; font-size:12pt">Rajat<br>
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<div name="divtagdefaultwrapper" style="font-family:Calibri; font-size:12pt"><br>
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<div name="divtagdefaultwrapper" style="font-family:Calibri"><font size="2">Rajat Mani Thomas</font></div>
<div name="divtagdefaultwrapper" style="font-family:Calibri"><font size="2">Social Brain Lab<br>
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<div><font size="2">Netherlands Institute for Neuroscience</font></div>
<div><font size="2">Amsterdam</font></div>
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