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<p>Hi Hassan, </p>
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<p>Is there any reason you want to use the FSL template brain? If not, it<span style="font-size: 12pt;"> might be worth trying SPM template like so: </span></p>
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<pre style="white-space: pre-wrap;">[mri] = ft_read_mri('~pathtofieldtrip/template/anatomy/single_subj_T1');</pre>
<pre style="white-space: pre-wrap;">mri.coordsys ='SPM'</pre>
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<div>Hope this works out for you, </div>
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<div>Rob</div>
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