<div dir="ltr">itab_raw is supported directly in the code of ft_read_data. You should try reading your data with ft_preprocessing function as in the tutorials. If that works I suggest you contact Francoise Tadel and tell him that you have data that you can read with Fieldtrip and want to import it into Brainstorm. I'm sure he'll think of something easier than writing it out in the CTF format.<div><br></div><div>Best,</div><div><br></div><div>Vladimir</div></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Aug 20, 2015 at 4:03 PM, Daphné Bertrand-Dubois <span dir="ltr"><<a href="mailto:daphbd1994@hotmail.com" target="_blank">daphbd1994@hotmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div><div dir="ltr">Thank you!<div><br></div><div>In fact, I wanted .ds because I wanted to use Brainstorm (and brainstorm doesn't read ITAB data format). If I can't that's ok, I will use Fieldtrip! </div><div><br></div><div>I could find <i>read_itab_mhd</i> but I don't find <i>read_itab_raw</i> (mines are .raw from ITAB). I also found <i>itab2grad. :)</i><br><br>Best,</div><div>Daphné<br><div><hr>Date: Thu, 20 Aug 2015 16:09:09 +0100<br>From: <a href="mailto:litvak.vladimir@gmail.com" target="_blank">litvak.vladimir@gmail.com</a><br>To: <a href="mailto:fieldtrip@science.ru.nl" target="_blank">fieldtrip@science.ru.nl</a><div><div class="h5"><br>Subject: Re: [FieldTrip] Convert .mat to .ds<br><br><div dir="ltr">Just to add to Jim's point, some ITAB formats are supported in Fieldtrip (I see itab_raw and itab_mhd). If you can get your data to be in one of those formats, things will be much easier for you.<div><br></div><div>Best,</div><div><br></div><div>Vladimir</div></div><div><br><div>On Thu, Aug 20, 2015 at 4:05 PM, Herring, J.D. (Jim) <span dir="ltr"><<a href="mailto:j.herring@donders.ru.nl" target="_blank">j.herring@donders.ru.nl</a>></span> wrote:<br><blockquote style="border-left:1px #ccc solid;padding-left:1ex">
<div lang="EN-US">
<div>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Dear Daphne,<u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">If you are trying to read your own data format into fieldtrip, perhaps you should have a look at this page:
<a href="http://www.fieldtriptoolbox.org/faq/how_can_i_import_my_own_dataformat" target="_blank">
http://www.fieldtriptoolbox.org/faq/how_can_i_import_my_own_dataformat</a><u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">It would be easier to transform your data format to be used in Fieldtrip than to first convert it to a CTF format and then read it into Fieldtrip.<u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Best,<u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Jim<u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
<div>
<div style="border:none;border-top:solid #b5c4df 1.0pt;padding:3.0pt 0cm 0cm 0cm">
<p><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif""> <a href="mailto:fieldtrip-bounces@science.ru.nl" target="_blank">fieldtrip-bounces@science.ru.nl</a> [mailto:<a href="mailto:fieldtrip-bounces@science.ru.nl" target="_blank">fieldtrip-bounces@science.ru.nl</a>]
<b>On Behalf Of </b>Daphné Bertrand-Dubois<br>
<b>Sent:</b> donderdag 20 augustus 2015 16:14<br>
<b>To:</b> FieldTrip discussion list</span></p><div><div><br>
<b>Subject:</b> Re: [FieldTrip] Convert .mat to .ds<u></u><u></u></div></div><br>
</div>
</div><div><div>
<p><u></u> <u></u></p>
<div>
<p><span style="font-family:"Calibri","sans-serif"">Thank you!<u></u><u></u></span></p>
<div>
<p><span style="font-family:"Calibri","sans-serif""><u></u> <u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif"">It was my error : I downloaded an older version, the one on the top of the list!<u></u><u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif""><u></u> <u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif"">I am a little bit confused, it looks like if I need to put .ds as an input file. I just have .mat times-series that doesn't come from CTF so I cannot use readCTFds.m. Would it be possible
to convert .mat times-series (nSensor x ntimes-series) to .ds?<u></u><u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif""><u></u> <u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif"">Best,<u></u><u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif""><u></u> <u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif"">Daphné<u></u><u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif""><u></u> <u></u></span></p>
<div>
<div align="center" style="text-align:center"><span style="font-family:"Calibri","sans-serif"">
<hr size="2" width="100%" align="center">
</span></div>
<p><span style="font-family:"Calibri","sans-serif"">From:
<a href="mailto:j.herring@donders.ru.nl" target="_blank">j.herring@donders.ru.nl</a><br>
To: <a href="mailto:fieldtrip@science.ru.nl" target="_blank">fieldtrip@science.ru.nl</a><br>
Date: Thu, 20 Aug 2015 07:37:20 +0000<br>
Subject: Re: [FieldTrip] Convert .mat to .ds<u></u><u></u></span></p>
<div>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Dear Daphne,</span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"> </span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">I have checked for you and the newest available version of fieldtrip (also fieldtrip-lite) includes writeCTFds.m in the folder ‘fieldtrip\external\ctf\’. I
have also checked a version from 2010 and it was there back then as well. </span>
<span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"> </span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Best,</span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"> </span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">Jim</span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<p><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"> </span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<div>
<div style="border:none;border-top:solid #b5c4df 1.0pt;padding:3.0pt 0cm 0cm 0cm">
<p><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">
<a href="mailto:fieldtrip-bounces@science.ru.nl" target="_blank">fieldtrip-bounces@science.ru.nl</a> [<a href="mailto:fieldtrip-bounces@science.ru.nl" target="_blank">mailto:fieldtrip-bounces@science.ru.nl</a>]
<b>On Behalf Of </b>Daphné Bertrand-Dubois<br>
<b>Sent:</b> woensdag 19 augustus 2015 17:19<br>
<b>To:</b> <a href="mailto:fieldtrip@science.ru.nl" target="_blank">fieldtrip@science.ru.nl</a><br>
<b>Subject:</b> [FieldTrip] Convert .mat to .ds</span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
</div>
</div>
<p><span style="font-family:"Calibri","sans-serif""> <u></u><u></u></span></p>
<div>
<p><span style="font-family:"Tahoma","sans-serif"">Hi,</span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<div>
<p><span style="font-family:"Calibri","sans-serif""> <u></u><u></u></span></p>
</div>
<div>
<p><span style="font-family:"Tahoma","sans-serif"">I have data (from the MEG at ITAB) that cannot be process by fieldtrip. Howerver, we have convert them into .mat file and I would like them to be in .ds format so I can process the data.</span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
<div>
<p><span style="font-family:"Calibri","sans-serif""> <u></u><u></u></span></p>
</div>
<div>
<p><span style="font-family:"Tahoma","sans-serif"">I read this message: </span><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
</div>
<div>
<p><span style="font-family:"Calibri","sans-serif""> <u></u><u></u></span></p>
</div>
<div>
<p><b><span style="font-family:"Tahoma","sans-serif"">" Hello z.imane</span></b><span style="font-family:"Calibri","sans-serif""><u></u><u></u></span></p>
</div>
<div>
<pre style="white-space:pre-wrap"><b><span style="font-family:"Tahoma","sans-serif""> </span></b><u></u><u></u></pre>
<pre><b><span style="font-family:"Tahoma","sans-serif"">To convert .mat to .ds, try using the function writeCTFds.m located in the</span></b><u></u><u></u></pre>
<pre><b><span style="font-family:"Tahoma","sans-serif"">fieldtrip folder /fieldtrip/external/ctf/</span></b><u></u><u></u></pre>
<pre><b><span style="font-family:"Tahoma","sans-serif""> </span></b><u></u><u></u></pre>
<pre><b><span style="font-family:"Tahoma","sans-serif"">Best</span></b><u></u><u></u></pre>
<pre><b><span style="font-family:"Tahoma","sans-serif"">Bankim Subhash Chander "</span></b><u></u><u></u></pre>
<pre style="white-space:pre-wrap"><span style="font-family:"Tahoma","sans-serif"">But I did not find the "external" folder with the function writeCTFd.m inside. Maybe it is because I have the new version?</span><u></u><u></u></pre>
<pre style="white-space:pre-wrap"><span style="font-family:"Tahoma","sans-serif"">Best regards,</span><u></u><u></u></pre>
<pre style="white-space:pre-wrap"><span style="font-family:"Tahoma","sans-serif"">Daphné</span><u></u><u></u></pre>
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