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Hello Tyler,<br>
<br>
TRENTOOL does not support the exclusion of channels like FieldTrip
does (e.g. {'all', '-MLx', '-EOG'}), you have to explicitly specify
channels OR combinations of channels for analysis in the cfg
structure passed to TEprepare:<br>
<br>
% cfg.sgncmb = list of channelpairs cell array (Nx(source,
target))<br>
% or<br>
% cfg.channel = list of channels cell array - testing will be
done all-by-all<br>
<br>
If you provide a list of channel combinations in cfg.sgncmb,
TRENTOOL will analyze these combinations only; if you provide a list
of channels in cfg.channel, TEprepare will build all possible
channel combinations from the list and TRENTOOL will analyze these
combinations. (Also, channel names have to match the channel labels
in data.label.)<br>
<br>
So, a way to exclude bad channel combinations would be to provide a
list of all channels that should be included in the analysis in
cfg.channel and let TEprepare build the channel combinations from
that. <br>
<br>
I hope this answers your question. Please let me know if you
encounter any more problems.<br>
<br>
Best, <br>
Patricia<br>
<br>
<br>
<br>
On 04/11/2014 04:38 AM, Tyler Grummett wrote:<br>
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<p style="">Hello fieldtrip,<br>
</p>
<p style=""><br>
</p>
<p style="">Has anyone worked out how to handle bad channel
combinations in TRENTOOL using TEprepare?<br>
</p>
<p style=""><br>
</p>
<p style="">In my experience it just crashes. I am hoping for a
way to calculate the bad channel combinations before running
TEprepare.<br>
</p>
<p style=""><br>
</p>
<p style="">If anyone can help, that will be greatly
appreciated!!<br>
</p>
<p style=""><br>
</p>
<p style="">Tyler<br>
</p>
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<div style="font-size:13px">*************************
<div style="font-family:Tahoma"><br>
</div>
<div><font face="Arial"><i>Tyler Grummett ( BBSc,
BSc(Hons I))</i></font></div>
<div><font face="Arial"><i>PhD Candidate</i></font></div>
<div><font face="Arial"><i>Brain Signals Laboratory</i></font></div>
<div><font face="Arial"><i>Flinders University</i></font></div>
<div><font face="Arial"><i>Rm 5A301</i></font></div>
<div><font face="Arial"><i>Ext 66124</i></font></div>
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<pre wrap="">_______________________________________________
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<address><font color="#666666"><small><font face="Helvetica,
Arial, sans-serif">------------------------------------------------------------<br>
<br>
</font></small></font></address>
<address><font color="#666666"><small><font face="Helvetica,
Arial, sans-serif">Patricia Wollstadt, PhD Student<br>
<br>
</font></small></font></address>
<address><font color="#666666"><small> </small></font></address>
<address><font color="#666666"><small><font face="Helvetica,
Arial, sans-serif"> MEG Unit, Brain Imaging Center</font></small></font></address>
<address><font color="#666666"><small><font face="Helvetica,
Arial, sans-serif"> Goethe University, Frankfurt, Germany<br>
<br>
</font></small></font></address>
<address><font color="#666666"><small><font face="Helvetica,
Arial, sans-serif">Heinrich Hoffmann Strasse 10, Haus 93 B</font></small></font></address>
<address><font color="#666666"><small><font face="Helvetica,
Arial, sans-serif">D - 60528 Frankfurt am Main</font></small></font></address>
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