[FieldTrip] Atlas used for 15684 vertices sourcemodel

Puluto Go gopuluto at gmail.com
Mon May 8 14:50:26 CEST 2023


Hi Paolo,

Thanks a lot for your quick reply. Could you please send me the link to
download the Glasser Atlas?

best,
Fan

On Mon, 8 May 2023 at 14:25, Paolo Belardinelli <
paolo.belardinelli at gmail.com> wrote:

> Hi Fan.
>
> You can get the freesurfer generated mesh of the Glasser Atlas from the
> webpage of the van Essen et al. paper and decimate that consistently with
> the sourcemodel through the ft_postfreesurferscript.
>
> Best,
>
> Paolo
>
> On Mon, May 8, 2023 at 2:04 PM Puluto Go via fieldtrip <
> fieldtrip at science.ru.nl> wrote:
>
>> Dear FT experts,
>>
>> Hope you all are doing well. I used the standard pipeline,
>> https://urldefense.com/v3/__https://www.fieldtriptoolbox.org/tutorial/sourcemodel/__;!!HJOPV4FYYWzcc1jazlU!4s2zxcBjpSNd4376ghAPgJYRlhXkJ-ka20E-gAd4ZrJ62No5uv-IcTuCUqBh8fStxjLL2K6xdmxnVD4G2jFH8Q$ 
>> <https://urldefense.com/v3/__https://www.fieldtriptoolbox.org/tutorial/sourcemodel/__;!!HJOPV4FYYWzcc1jazlU!_hjVO1VbUWG0broPdCxr7Xqn2ppQIvubNCHuUYo04PEDDWmABEcO5XV2tM_Gl1QGRDW3hBeXdouBSg2J8PsX0A$>,
>> to generate a source mesh for each of my participants. The procedure
>> resulted in a 15684 vertices mesh for each participant. My questions are
>> as follows.
>>
>> 1), If there is an atlas corresponding to the 15684 vertices mesh in the
>> workbench output. If so, could you please tell me how it is named?  May I
>> use ft_read_atlas to read it?
>>
>> 2), the second one relates to the thread here,
>> https://mailman.science.ru.nl/pipermail/fieldtrip/2021-March/040784.html,
>> in which (the second solution) you specified the procedure to extract an
>> atlas for source mesh with 15684 vertices, could you please elaborate it a
>> little bit on how to do this? or are there template scripts in FT toolbox
>> to do this?
>>
>> Thanks a lot for your help in advance.
>>
>> best,
>> Fan
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>>
>
>
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>
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